Basic Information
Locus ID:
evm.TU.LG20.142
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 1326982 | 1331457 | + | evm.TU.LG20.142 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 59,896.57 Da | 33.30 | 83.38 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 54 | 312 | 3.68481E-141 | - |
| Pfam | PF13499 | EF-hand domain pair | 431 | 496 | 5.2E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 55 | 313 | 5.9E-76 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 361 | 419 | 4.3E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 322 | 5.53E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 522 | 3.11E-42 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 140 | 9.3E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 498 | 1.8E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 5.2E-60 | - |
| SMART | SM00054 | efh_1 | 470 | 498 | 8.0E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 55 | 313 | 2.2E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 432 | 460 | 0.017 | IPR002048 |
| SMART | SM00054 | efh_1 | 396 | 424 | 0.7 | IPR002048 |
| SMART | SM00054 | efh_1 | 360 | 388 | 0.023 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 392 | 427 | 9.101698 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 466 | 501 | 13.453381 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 49.68597 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 12.755995 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 479 | 491 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 88 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 405 | 417 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_021772090.1 | calcium-dependent protein kinase 8-like [Chenopodium quinoa] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AQN0 | Calcium-dependent protein kinase 8-like OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology