Basic Information
Locus ID:
evm.TU.LG20.1258
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 24183102 | 24186991 | - | evm.TU.LG20.1258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 27,441.90 Da | 39.69 | 70.68 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 16 | 242 | 1.2E-81 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 127 | 232 | 3.83E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 128 | 245 | 2.6E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 133 | 233 | 21.990383 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 75 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021619178.1 | auxin-responsive protein IAA16 [Manihot esculenta] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YKY9 | Auxin-responsive protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology