Basic Information
Locus ID:
evm.TU.LG20.1098
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 17478411 | 17500296 | + | evm.TU.LG20.1098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 64,364.34 Da | 41.41 | 91.90 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 147 | 232 | 3.1E-6 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 426 | 3.4E-14 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 433 | 537 | 2.4E-7 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 29 | 122 | 1.3E-20 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 555 | 6.18E-49 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 22 | 124 | 5.6E-24 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 408 | 543 | 1.2E-28 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 134 | 236 | 3.4E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 292 | 403 | 2.5E-36 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 131 | 236 | 14.759899 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 580 | 12.626622 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 23 | 125 | 19.150167 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 334 | 356 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021846122.1 | cysteine-rich receptor-like protein kinase 25 isoform X3 [Spinacia oleracea] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N953 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032582 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.797, evm.TU.LG20.1098 |