Basic Information
Locus ID:
evm.TU.LG20.1079
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Thaumatin-like protein 1b
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 17030396 | 17035000 | - | evm.TU.LG20.1079 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 42,193.64 Da | 57.16 | 69.51 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 29 | 229 | 1.6E-44 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 230 | 7.72E-53 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 231 | 8.7E-55 | IPR037176 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 385 | 7.9E-7 | - |
| SMART | SM00205 | tha2 | 25 | 229 | 2.6E-45 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 386 | 8.400557 | IPR000719 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 25 | 229 | 29.504763 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 80 | 96 | - | IPR017949 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 384 | - | IPR017441 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 120 | 136 | 9.4E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 24 | 36 | 9.4E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 219 | 228 | 9.4E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 9.4E-9 | IPR001938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 288 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20030.2 | Pathogenesis-related thaumatin superfamily protein. | 0 |
| RefSeq | XP_021719634.1 | cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa] | 0 |
| P83335 | Thaumatin-like protein 2 OS=Prunus persica OX=3760 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9CNN6 | Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22061 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40868, Sbi_jg40875 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1602, Seu_jg1603, Seu_jg4259 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017178 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ... |