Basic Information
Locus ID:
evm.TU.LG19.937
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
UBC4
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 31800145 | 31802475 | - | evm.TU.LG19.937 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 21,409.63 Da | 51.52 | 63.58 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 142 | 5.94582E-52 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 10 | 142 | 1.9E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 4 | 148 | 5.09E-45 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 160 | 1.8E-49 | IPR016135 |
| SMART | SM00212 | ubc_7 | 4 | 148 | 5.1E-49 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 148 | 41.201736 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 73 | 89 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 155 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.1 | ubiquitin-conjugating enzyme 5. | 0 |
| RefSeq | XP_010087938.1 | ubiquitin-conjugating enzyme E2-23 kDa isoform X2 [Morus notabilis] | 0 |
| P42749 | Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2 | 0 | |
| TrEMBL | W9QP82 | Ubiquitin-conjugating enzyme E2 5 OS=Morus notabilis OX=981085 GN=L484_012389 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology