Basic Information
Locus ID:
evm.TU.LG19.367
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 16716853 | 16717725 | - | evm.TU.LG19.367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 14,033.65 Da | 28.83 | 85.39 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 49 | 82 | 8.1E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 9 | 95 | 5.25E-18 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 129 | 8.4E-23 | IPR015943 |
| SMART | SM00320 | WD40_4 | 44 | 83 | 2.5E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2 | 38 | 34.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 51 | 84 | 11.418318 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 51 | 92 | 14.251289 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0061s00007.v1.0 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG05.1266, evm.TU.LG12.496, evm.TU.LG19.367 |