Basic Information
Locus ID:
evm.TU.LG19.257
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 11964879 | 11971505 | - | evm.TU.LG19.257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 76,287.63 Da | 44.61 | 83.29 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 137 | 196 | 3.9E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 406 | 672 | 6.6E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 7.7E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 672 | 1.2E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 231 | 3.91E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 258 | 8.7E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 481 | 9.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 691 | 8.4E-56 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 681 | 36.286938 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 138 | 151 | 2.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 159 | 172 | 2.9E-5 | - |
| Coils | Coil | Coil | 145 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_021720269.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X2 [Chenopodium quinoa] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9W6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology