Basic Information
Locus ID:
evm.TU.LG19.172
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 7947638 | 7954076 | - | evm.TU.LG19.172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 76,199.95 Da | 36.51 | 88.89 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 114 | 174 | 3.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 9.3E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 673 | 9.6E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 673 | 3.01E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 229 | 1.47E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 695 | 8.8E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 255 | 2.9E-48 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 482 | 8.1E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 676 | 34.294044 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 140 | 153 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 161 | 174 | 3.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 704 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021761852.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Chenopodium quinoa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9M6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology