Basic Information
Locus ID:
evm.TU.LG19.1110
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 33776321 | 33785997 | - | evm.TU.LG19.1110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 99,103.64 Da | 46.89 | 82.74 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 709 | 885 | 1.20953E-66 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 290 | 884 | 3.1E-83 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 288 | 887 | 4.32E-109 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 10 | 135 | 9.7E-6 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 623 | 890 | 4.7E-57 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 277 | 514 | 3.0E-67 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 290 | 887 | 56.897808 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 291 | 306 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 830 | 847 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 263 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021861826.1 | ubiquitin carboxyl-terminal hydrolase 8 [Spinacia oleracea] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C9E6S4 | Ubiquitin carboxyl-terminal hydrolase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology