Basic Information
Locus ID:
evm.TU.LG18.97
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 5429826 | 5432934 | - | evm.TU.LG18.97 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 104,077.34 Da | 41.57 | 88.54 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 612 | 886 | 3.72302E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 343 | 381 | 0.0033 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 609 | 883 | 1.1E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 82 | 7.5E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 592 | 905 | 2.97E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 451 | 3.06E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 469 | 7.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 577 | 682 | 1.0E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 51 | 336 | 9.3E-66 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 683 | 908 | 6.8E-58 | - |
| SMART | SM00220 | serkin_6 | 606 | 887 | 2.4E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 606 | 887 | 40.103119 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 612 | 634 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 730 | 742 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010685103.2 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RIU5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_061690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology