Basic Information
Locus ID:
evm.TU.LG18.822
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Phosphatidylinositol 4-kinase gamma
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 23609504 | 23610206 | + | evm.TU.LG18.822 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 16,174.48 Da | 36.32 | 98.72 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 41 | 105 | 1.2E-13 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 34 | 107 | 1.29E-12 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 30 | 121 | 2.2E-12 | - |
| SMART | SM00213 | ubq_7 | 36 | 106 | 6.1E-5 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 32 | 105 | 12.596278 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24240.1 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein. | 0 |
| RefSeq | XP_021764001.1 | phosphatidylinositol 4-kinase gamma 3-like [Chenopodium quinoa] | 0 |
| Q9FNF8 | Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9AU76 | 1-phosphatidylinositol 4-kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg48278 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg27621 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G64470.1 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.822, evm.TU.LG23.629 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5435 |