Basic Information
Locus ID:
evm.TU.LG18.628
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 19858529 | 19861207 | - | evm.TU.LG18.628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.32 | 67,056.81 Da | 42.22 | 105.89 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 542 | 564 | 0.28 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 198 | 221 | 0.81 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 518 | 539 | 0.55 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 250 | 272 | 0.6 | IPR001611 |
| Pfam | PF00646 | F-box domain | 59 | 98 | 7.7E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 328 | 566 | 1.49E-34 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 51 | 95 | 7.59E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 144 | 372 | 4.71E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 400 | 490 | 2.4E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 280 | 399 | 2.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 277 | 1.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 491 | 587 | 3.6E-20 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 224 | 249 | 4.2E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 436 | 461 | 0.13 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 198 | 223 | 5.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 462 | 487 | 0.012 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 542 | 566 | 0.034 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 330 | 355 | 0.95 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 568 | 593 | 54.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 250 | 275 | 0.0078 | IPR006553 |
| SMART | SM00256 | fbox_2 | 62 | 102 | 1.7E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 0.21 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 516 | 541 | 13.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 594 | 619 | 65.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 172 | 197 | 0.29 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 356 | 381 | 7.8 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_010687976.2 | EIN3-binding F-box protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AB06 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology