Basic Information
Locus ID:
evm.TU.LG18.554
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 18576274 | 18578081 | + | evm.TU.LG18.554 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 18,358.43 Da | 55.69 | 69.88 | -1.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 43 | 119 | 4.12483E-44 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 50 | 95 | 4.3E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 49 | 119 | 4.19E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 36 | 127 | 2.5E-18 | IPR036638 |
| SMART | SM00353 | finulus | 52 | 101 | 1.3E-14 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 46 | 95 | 16.19599 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 162 | - | - |
| Coils | Coil | Coil | 92 | 119 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17880.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_022737560.1 | transcription factor MYC2-like [Durio zibethinus] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YM12 | 2-alkenal reductase (NAD(P)(+)) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology