Basic Information
Locus ID:
evm.TU.LG18.493
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
CPK25
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 17637242 | 17654858 | - | evm.TU.LG18.493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 110,390.27 Da | 47.86 | 72.75 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 112 | 370 | 1.16259E-137 | - |
| CDD | cd00051 | EFh | 419 | 479 | 2.03212E-22 | IPR002048 |
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 801 | 884 | 1.5E-26 | IPR027329 |
| Pfam | PF13499 | EF-hand domain pair | 419 | 479 | 4.3E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 490 | 550 | 1.0E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 113 | 371 | 1.6E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 111 | 372 | 1.89E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 410 | 553 | 3.86E-50 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 379 | 554 | 1.4E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 115 | 198 | 2.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 199 | 378 | 1.9E-57 | - |
| SMART | SM00054 | efh_1 | 524 | 552 | 1.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 490 | 518 | 4.2E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 113 | 371 | 5.8E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 454 | 482 | 1.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 418 | 446 | 9.6E-8 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 113 | 371 | 47.198387 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 450 | 485 | 13.313904 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 522 | 555 | 12.755995 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 414 | 449 | 16.996096 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 486 | 521 | 15.963966 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 533 | 545 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 233 | 245 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 119 | 146 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 463 | 475 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 427 | 439 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 499 | 511 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 928 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 908 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 983 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 954 | 977 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 626 | - | - |
| Coils | Coil | Coil | 816 | 846 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021858999.1 | calcium-dependent protein kinase 26-like [Spinacia oleracea] | 0 |
| Q9ZV15 | Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CPK20 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J4ZG70 | Calcium-dependent protein kinase 20 OS=Nyssa sinensis OX=561372 GN=F0562_017348 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology