Basic Information
Locus ID:
evm.TU.LG18.1757
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 37821950 | 37826435 | - | evm.TU.LG18.1757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 60,407.59 Da | 35.16 | 83.86 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 57 | 315 | 2.10995E-138 | - |
| Pfam | PF13499 | EF-hand domain pair | 434 | 500 | 1.2E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 58 | 316 | 2.8E-76 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 364 | 422 | 1.4E-7 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 325 | 2.29E-89 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 344 | 526 | 6.64E-42 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 143 | 2.2E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 324 | 2.7E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 325 | 502 | 2.5E-49 | - |
| SMART | SM00054 | efh_1 | 435 | 463 | 0.0018 | IPR002048 |
| SMART | SM00220 | serkin_6 | 58 | 316 | 7.2E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 474 | 502 | 1.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 363 | 391 | 0.14 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 431 | 466 | 13.537066 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 13.425486 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 316 | 50.251331 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 359 | 394 | 11.305434 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 91 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 444 | 456 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_021772090.1 | calcium-dependent protein kinase 8-like [Chenopodium quinoa] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AQN0 | Calcium-dependent protein kinase 8-like OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology