Basic Information
Locus ID:
evm.TU.LG18.1182
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 31410806 | 31421127 | + | evm.TU.LG18.1182 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 167,733.47 Da | 38.22 | 106.25 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 1251 | 1471 | 5.80995E-124 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 318 | 606 | 3.80822E-92 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 934 | 1227 | 9.17602E-90 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 632 | 832 | 1.02995E-107 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 938 | 1180 | 8.1E-31 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1270 | 1418 | 8.7E-30 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 651 | 784 | 9.0E-19 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 319 | 585 | 4.6E-27 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 626 | 853 | 4.3E-56 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 313 | 614 | 8.89E-36 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1243 | 1483 | 1.18E-68 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 934 | 1233 | 8.11E-49 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1236 | 1488 | 3.0E-82 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 289 | 615 | 1.8E-50 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 898 | 1234 | 4.2E-53 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 630 | 861 | 1.5E-68 | IPR027417 |
| SMART | SM00382 | AAA_5 | 659 | 832 | 6.6E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1279 | 1471 | 7.0E-13 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1253 | 1487 | 17.327065 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 936 | 1200 | 32.932247 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 632 | 855 | 21.655441 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 317 | 598 | 33.900063 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 757 | 771 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 883 | 901 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 870 | 901 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_021853038.1 | putative ABC transporter C family member 15 [Spinacia oleracea] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5B6Z841 | ABC-type xenobiotic transporter OS=Davidia involucrata OX=16924 GN=Din_009833 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology