Basic Information
Locus ID:
evm.TU.LG18.1088
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 30016143 | 30022455 | - | evm.TU.LG18.1088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 82,227.65 Da | 39.46 | 85.60 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 338 | 635 | 1.2E-25 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 333 | 641 | 4.19E-41 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 23 | 328 | 4.71E-31 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 332 | 642 | 2.0E-50 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 22 | 329 | 9.1E-27 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 24 | 329 | 20.565842 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 333 | 641 | 30.196281 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 723 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58050.1 | SHV3-like 4. | 0 |
| RefSeq | XP_021741895.1 | glycerophosphodiester phosphodiesterase GDPDL7-like [Chenopodium quinoa] | 0 |
| Q9FGT9 | Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 GN=GDPDL6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N884 | glycerophosphodiester phosphodiesterase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology