Basic Information
Locus ID:
evm.TU.LG18.1048
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 29225082 | 29231237 | - | evm.TU.LG18.1048 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 71,519.96 Da | 42.95 | 88.17 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 128 | 3.12791E-45 | - |
| Pfam | PF03000 | NPH3 family | 222 | 485 | 1.6E-92 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 119 | 3.3E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 135 | 4.94E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 9 | 177 | 7.2E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 139 | 0.0011 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 103 | 11.295418 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 222 | 509 | 91.747963 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 629 | - | - |
| Coils | Coil | Coil | 558 | 585 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021725340.1 | BTB/POZ domain-containing protein At1g30440-like [Chenopodium quinoa] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803N9X6 | BTB/POZ domain-containing protein At1g30440 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology