Basic Information
Locus ID:
evm.TU.LG17.727
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 9808222 | 9810210 | + | evm.TU.LG17.727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 72,227.19 Da | 51.55 | 70.88 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 476 | 552 | 6.53894E-47 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 49 | 228 | 2.5E-51 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 483 | 528 | 1.8E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 482 | 551 | 4.45E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 471 | 559 | 4.2E-18 | IPR036638 |
| SMART | SM00353 | finulus | 485 | 534 | 7.7E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 479 | 528 | 17.110519 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 488 | - | - |
| Coils | Coil | Coil | 525 | 552 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_021765652.1 | LOW QUALITY PROTEIN: transcription factor MYC2-like [Chenopodium quinoa] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L605 | BHLH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology