Basic Information
Locus ID:
evm.TU.LG17.446
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 5127766 | 5137598 | + | evm.TU.LG17.446 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 92,473.45 Da | 41.85 | 86.51 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 555 | 688 | 1.5592E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 557 | 687 | 2.5E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 711 | 753 | 2.2E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 62 | 348 | 1.11E-5 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 517 | 756 | 3.05E-61 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 516 | 801 | 5.1E-97 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 689 | 794 | 5.1E-97 | - |
| SMART | SM00382 | AAA_5 | 553 | 690 | 2.8E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 660 | 679 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 775 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021838253.1 | uncharacterized protein LOC110777995 [Spinacia oleracea] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RKA8 | AAA domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_056920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology