HalophFGD

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Basic Information
Locus ID: evm.TU.LG17.201
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr17 2122610 2123977 + evm.TU.LG17.201
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.07 14,729.43 Da 56.28 86.10 -0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14368 Probable lipid transfer 21 99 5.9E-5 IPR016140
SUPERFAMILY SSF47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 50 97 5.74E-5 IPR036312
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010676193.1 putative uncharacterized protein DDB_G0290521 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A0K9RGA0 AAI domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_070140 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 3 gene_14841, gene_14846, gene_1931
Amaranthaceae Atriplex hortensis 5 Ah004731, Ah004732, Ah004733, Ah004734, Ah004735
Amaranthaceae Beta vulgaris 3 BVRB_5g098120, BVRB_5g098130, BVRB_5g098140
Amaranthaceae Salicornia bigelovii 6 Sbi_jg12924, Sbi_jg12925, Sbi_jg4916, Sbi_jg4919, Sbi_jg7185 ...
Sbi_jg52937
Amaranthaceae Salicornia europaea 4 Seu_jg12841, Seu_jg12848, Seu_jg8918, Seu_jg8919
Amaranthaceae Suaeda aralocaspica 1 GOSA_00001500
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.5BG0000650, CQ.Regalona.r1.5BG0000700 ...
CQ.Regalona.r1.5BG0000710, CQ.Regalona.r1.5BG0000720, CQ.Regalona.r1.5BG0000730
Portulacaceae Portulaca oleracea 5 evm.TU.LG10.190, evm.TU.LG10.205, evm.TU.LG10.207 ...
evm.TU.LG17.199, evm.TU.LG17.201
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.