Basic Information
Locus ID:
evm.TU.LG17.1546
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 38633115 | 38635798 | - | evm.TU.LG17.1546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 64,862.48 Da | 36.16 | 106.66 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 535 | 554 | 0.66 | IPR001611 |
| Pfam | PF00646 | F-box domain | 60 | 98 | 8.2E-7 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 215 | 233 | 1.4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 319 | 341 | 0.64 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 139 | 352 | 8.24E-31 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 313 | 576 | 8.37E-34 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 97 | 7.98E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 416 | 4.3E-28 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 53 | 99 | 8.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 128 | 231 | 3.7E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 422 | 615 | 5.0E-25 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 163 | 188 | 0.0041 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 318 | 343 | 0.008 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 558 | 583 | 52.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 241 | 263 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 532 | 556 | 3.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 189 | 214 | 3.6E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 215 | 240 | 0.21 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 450 | 475 | 0.25 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 137 | 162 | 160.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 344 | 369 | 3.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 506 | 531 | 5.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 479 | 504 | 1.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 370 | 395 | 36.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 63 | 104 | 2.5E-5 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_010696236.1 | EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9ENK7 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology