Basic Information
Locus ID:
evm.TU.LG17.1285
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 34492396 | 34508543 | + | evm.TU.LG17.1285 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 113,902.22 Da | 31.93 | 87.84 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 36 | 311 | 0.0 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 37 | 348 | 2.7E-96 | IPR000602 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 594 | 809 | 9.5E-49 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 891 | 1002 | 1.3E-9 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 353 | 445 | 2.1E-19 | IPR015341 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 450 | 1005 | 5.02E-143 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 25 | 349 | 1.22E-112 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 352 | 447 | 1.05E-27 | IPR028995 |
| Gene3D | G3DSA:2.70.98.30 | - | 592 | 857 | 5.8E-95 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 469 | 591 | 4.3E-27 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 396 | 451 | 2.8E-20 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 878 | 1010 | 3.9E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 317 | 395 | 3.1E-30 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 36 | 316 | 6.5E-125 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 353 | 427 | 2.2E-19 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010682958.2 | alpha-mannosidase At3g26720 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CJX7 | Alpha-mannosidase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology