Basic Information
Locus ID:
evm.TU.LG17.1277
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 34257594 | 34260752 | + | evm.TU.LG17.1277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 114,428.85 Da | 36.63 | 105.34 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 782 | 1050 | 3.34865E-91 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 168 | 183 | 1.3 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 243 | 264 | 0.35 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 64 | 4.3E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 577 | 636 | 1.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 778 | 977 | 2.5E-42 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 391 | 6.75E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 756 | 1047 | 8.5E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 292 | 675 | 1.53E-41 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 852 | 1051 | 1.8E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 189 | 2.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 741 | 851 | 1.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 277 | 4.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 409 | 687 | 2.5E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 408 | 6.5E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 647 | 673 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 575 | 599 | 12.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 776 | 1051 | 1.1E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 115 | 139 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 114 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 329 | 352 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1052 | 39.679096 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 896 | 908 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 782 | 804 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010682896.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MZH7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology