Basic Information
Locus ID:
evm.TU.LG17.1056
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 19563100 | 19578057 | - | evm.TU.LG17.1056 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 85,186.66 Da | 39.20 | 87.43 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 146 | 204 | 1.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 521 | 715 | 1.1E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 463 | 723 | 2.19E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 288 | 3.17E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 115 | 290 | 8.1E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 533 | 739 | 1.6E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 459 | 532 | 8.0E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 7 | 114 | 1.3E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 484 | 725 | 1.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 721 | 27.820671 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 490 | 512 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 573 | 585 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 758 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021866985.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Spinacia oleracea] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M3M9 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology