Basic Information
Locus ID:
evm.TU.LG16.768
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
CPK13
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 11221411 | 11228411 | - | evm.TU.LG16.768 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 59,193.09 Da | 38.90 | 87.71 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 53 | 311 | 1.56579E-136 | - |
| CDD | cd00051 | EFh | 431 | 493 | 2.97899E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 358 | 418 | 1.1E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 493 | 1.7E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 312 | 1.8E-74 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 519 | 2.15E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 319 | 2.56E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 139 | 2.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 1.3E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 496 | 4.1E-53 | - |
| SMART | SM00054 | efh_1 | 395 | 423 | 2.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 1.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 359 | 387 | 0.0014 | IPR002048 |
| SMART | SM00220 | serkin_6 | 54 | 312 | 4.9E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 467 | 495 | 1.3E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 15.350267 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 47.127716 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 14.876045 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 368 | 380 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 83 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 32 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021620700.1 | calcium-dependent protein kinase 13 [Manihot esculenta] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C8Z9H2 | Calcium/calmodulin-dependent protein kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology