Basic Information
Locus ID:
evm.TU.LG16.404
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 4808944 | 4816517 | + | evm.TU.LG16.404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 100,656.80 Da | 47.34 | 81.18 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 720 | 876 | 1.77921E-60 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 318 | 875 | 2.0E-87 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 45 | 143 | 2.5E-23 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 315 | 878 | 4.74E-112 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 26 | 143 | 9.55E-26 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 303 | 539 | 6.7E-69 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 157 | 242 | 9.1E-8 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 9 | 156 | 5.1E-36 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 676 | 882 | 3.7E-58 | - |
| SMART | SM00695 | dusp | 41 | 146 | 2.9E-28 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 317 | 878 | 59.758888 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 22 | 143 | 18.876234 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 318 | 333 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 820 | 837 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_021757775.1 | ubiquitin carboxyl-terminal hydrolase 10-like [Chenopodium quinoa] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C8YSW4 | Ubiquitin carboxyl-terminal hydrolase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology