Basic Information
Locus ID:
evm.TU.LG16.263
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 3068561 | 3070864 | + | evm.TU.LG16.263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 57,594.06 Da | 42.76 | 102.27 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 53 | 4.3E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 157 | 349 | 3.22E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 57 | 6.93E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 374 | 4.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 57 | 1.3E-7 | - |
| SMART | SM00256 | fbox_2 | 21 | 60 | 2.2E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 63 | 8.649649 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28410.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_010693452.2 | putative F-box protein At1g49610 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LV26 | Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana OX=3702 GN=At3g18150 PE=4 SV=2 | 0 | |
| TrEMBL | A0A8J4RIQ1 | F-box domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_002613 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology