Basic Information
Locus ID:
evm.TU.LG16.262
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 3057325 | 3064793 | + | evm.TU.LG16.262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 62,621.56 Da | 39.33 | 109.58 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 40 | 77 | 3.2E-7 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 146 | 410 | 5.1E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 38 | 83 | 3.01E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 416 | 4.7E-13 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 26 | 78 | 1.9E-7 | - |
| SMART | SM00256 | fbox_2 | 44 | 84 | 0.0015 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 38 | 74 | 9.312009 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13985.1 | FBD-associated F-box protein. | 0 |
| RefSeq | XP_010693452.2 | putative F-box protein At1g49610 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q4PSI6 | FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana OX=3702 GN=At4g13985 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J4RIQ1 | F-box domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_002613 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology