Basic Information
Locus ID:
evm.TU.LG16.127
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 1339331 | 1343856 | + | evm.TU.LG16.127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 50,444.10 Da | 39.75 | 71.63 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 270 | 305 | 1.5E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 310 | 350 | 0.0035 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 189 | 246 | 7.0E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 399 | 435 | 5.2E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 141 | 443 | 2.01E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 131 | 439 | 7.3E-124 | IPR015943 |
| SMART | SM00320 | WD40_4 | 182 | 222 | 0.013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 266 | 305 | 4.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 308 | 350 | 2.9E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 225 | 262 | 0.091 | IPR001680 |
| SMART | SM00320 | WD40_4 | 396 | 435 | 2.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 138 | 179 | 170.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 273 | 314 | 13.516088 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 273 | 305 | 10.917412 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 403 | 436 | 14.41838 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 403 | 436 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 190 | 231 | 9.906923 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 422 | 436 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 62 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_021735944.1 | protein FIZZY-RELATED 2-like [Chenopodium quinoa] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RXT9 | ANAPC4_WD40 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_023120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology