HalophFGD

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Basic Information
Locus ID: evm.TU.LG16.1181
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr16 29435951 29437674 + evm.TU.LG16.1181
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.02 49,806.18 Da 54.80 51.74 -0.75
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 235 250 - -
MobiDBLite mobidb-lite consensus disorder prediction 192 285 - -
MobiDBLite mobidb-lite consensus disorder prediction 196 212 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034197981.1 uncharacterized protein LOC117613481 [Prunus dulcis] 0
TrEMBL A0A4Y1RVD1 PMD domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_020472 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Portulacaceae Portulaca oleracea 40 evm.TU.LG01.1647, evm.TU.LG01.964, evm.TU.LG01.995 ...
evm.TU.LG02.1665, evm.TU.LG02.1887, evm.TU.LG02.2086, evm.TU.LG03.1481, evm.TU.LG03.1584, evm.TU.LG03.2582, evm.TU.LG05.1304, evm.TU.LG05.1469, evm.TU.LG05.2155, evm.TU.LG05.2300, evm.TU.LG06.507, evm.TU.LG06.718, evm.TU.LG06.938, evm.TU.LG07.1205, evm.TU.LG07.1728, evm.TU.LG08.243, evm.TU.LG09.325, evm.TU.LG10.1454, evm.TU.LG10.1472, evm.TU.LG11.100, evm.TU.LG11.198, evm.TU.LG12.177, evm.TU.LG12.74, evm.TU.LG13.1564, evm.TU.LG13.1569, evm.TU.LG13.1658, evm.TU.LG16.1125, evm.TU.LG16.1180, evm.TU.LG16.1181, evm.TU.LG17.1103, evm.TU.LG17.1206, evm.TU.LG21.1256, evm.TU.LG22.1408, evm.TU.LG22.819, evm.TU.LG24.300, evm.TU.LG24.314, evm.TU.LG24.385
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.