Basic Information
Locus ID:
evm.TU.LG16.1162
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
PAS fold
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 28712997 | 28722635 | + | evm.TU.LG16.1162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 77,675.01 Da | 47.35 | 75.22 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 64 | 165 | 2.94873E-14 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 429 | 675 | 1.31775E-126 | - |
| Pfam | PF13426 | PAS domain | 69 | 165 | 4.7E-12 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 674 | 4.4E-67 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 59 | 162 | 5.41E-19 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 675 | 3.51E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 502 | 687 | 2.7E-62 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 65 | 170 | 2.8E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 416 | 500 | 3.0E-31 | - |
| SMART | SM00091 | pas_2 | 55 | 121 | 2.7E-9 | IPR000014 |
| SMART | SM00220 | serkin_6 | 423 | 683 | 3.4E-54 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 59 | 166 | 1.1E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 53 | 124 | 14.481349 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 683 | 43.311535 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 497 | 510 | 4.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 646 | 668 | 4.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 602 | 624 | 4.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 536 | 554 | 4.4E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 250 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_010671736.2 | kinase suppressor of Ras 1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N2C5 | PAS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology