Basic Information
Locus ID:
evm.TU.LG16.1013
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 22063138 | 22117384 | + | evm.TU.LG16.1013 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 126,370.25 Da | 45.61 | 77.86 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 710 | 750 | 2.18369E-18 | - |
| Pfam | PF16135 | Tify domain binding domain | 295 | 350 | 8.3E-11 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 711 | 752 | 1.0E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 644 | 693 | 1.4E-15 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 951 | 1056 | 5.74E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 798 | 852 | 7.31E-10 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 706 | 756 | 3.99E-15 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 775 | 863 | 5.3E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 697 | 774 | 2.1E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 710 | 751 | 8.2E-13 | IPR001965 |
| SMART | SM00249 | PHD_3 | 798 | 854 | 0.0094 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 708 | 753 | 10.3978 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 711 | 750 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 492 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021774585.1 | uncharacterized protein LOC110738482 [Chenopodium quinoa] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9EA64 | PHD-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology