Basic Information
Locus ID:
evm.TU.LG15.826
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 8943139 | 8951426 | + | evm.TU.LG15.826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 111,383.51 Da | 37.69 | 100.55 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 325 | 584 | 3.0E-44 | IPR001245 |
| Pfam | PF13041 | PPR repeat family | 773 | 815 | 2.9E-8 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 632 | 655 | 0.081 | IPR002885 |
| Pfam | PF01476 | LysM domain | 42 | 87 | 0.095 | IPR018392 |
| Pfam | PF01535 | PPR repeat | 911 | 940 | 0.015 | IPR002885 |
| Pfam | PF12854 | PPR repeat | 699 | 724 | 4.4E-7 | IPR002885 |
| Pfam | PF13041 | PPR repeat family | 837 | 886 | 5.9E-16 | IPR002885 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 584 | 1.48E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 394 | 583 | 3.0E-53 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 584 | 751 | 2.2E-16 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 752 | 832 | 2.5E-12 | IPR011990 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 393 | 1.2E-26 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 903 | 972 | 6.7E-9 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 833 | 902 | 6.4E-22 | IPR011990 |
| SMART | SM00257 | LysM_2 | 41 | 87 | 0.035 | IPR018392 |
| SMART | SM00220 | serkin_6 | 323 | 596 | 1.7E-37 | IPR000719 |
| SMART | SM00257 | LysM_2 | 103 | 149 | 1.1 | IPR018392 |
| SMART | SM00257 | LysM_2 | 168 | 209 | 6.6 | IPR018392 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 841 | 873 | 6.8E-7 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 699 | 731 | 4.2E-7 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 875 | 908 | 2.6E-6 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 775 | 804 | 8.0E-5 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 911 | 942 | 1.3E-4 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 806 | 838 | 1.3E-5 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 696 | 730 | 11.629997 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 768 | 802 | 9.240434 | IPR002885 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 40 | 86 | 9.055058 | IPR018392 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 908 | 942 | 10.676364 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 838 | 872 | 11.651919 | IPR002885 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 323 | 596 | 39.396416 | IPR000719 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 873 | 907 | 11.564229 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 803 | 837 | 9.941957 | IPR002885 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 329 | 351 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 438 | 450 | - | IPR008271 |
| Coils | Coil | Coil | 890 | 910 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_030539681.1 | lysM domain receptor-like kinase 3 isoform X2 [Rhodamnia argentea] | 0 |
| A8R7E6 | Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A059DE53 | Protein kinase domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A01104 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology