Basic Information
Locus ID:
evm.TU.LG15.531
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 5254337 | 5262646 | + | evm.TU.LG15.531 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 62,541.61 Da | 46.57 | 92.83 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02440 | AdoMet_MTases | 331 | 434 | 1.9705E-5 | - |
| Pfam | PF13639 | Ring finger domain | 207 | 249 | 6.1E-12 | IPR001841 |
| Pfam | PF08241 | Methyltransferase domain | 333 | 421 | 2.1E-8 | IPR013216 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 295 | 435 | 3.44E-16 | IPR029063 |
| SUPERFAMILY | SSF57850 | RING/U-box | 203 | 255 | 1.97E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 201 | 260 | 1.1E-17 | IPR013083 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 300 | 557 | 1.0E-41 | - |
| SMART | SM00184 | ring_2 | 208 | 248 | 3.0E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 208 | 249 | 12.40076 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41380.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. | 0 |
| RefSeq | XP_021845773.1 | putative methyltransferase DDB_G0268948 [Spinacia oleracea] | 0 |
| Q8GXF8 | E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SGR9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9AXK0 | Methyltransf_11 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology