Basic Information
Locus ID:
evm.TU.LG15.47
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 379501 | 385353 | - | evm.TU.LG15.47 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 84,224.90 Da | 53.63 | 78.13 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 148 | 3.7816E-53 | - |
| CDD | cd14066 | STKc_IRAK | 445 | 705 | 6.60839E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 441 | 692 | 1.7E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 421 | 698 | 3.51E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 120 | 8.37E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 511 | 2.0E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 3 | 124 | 5.6E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 715 | 1.0E-47 | - |
| SMART | SM00220 | serkin_6 | 439 | 702 | 3.8E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 702 | 35.919453 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 557 | 569 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 192 | - | - |
| Coils | Coil | Coil | 321 | 348 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021729301.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8Q5Z6 | U-box domain-containing protein 35-like OS=Nelumbo nucifera OX=4432 GN=LOC104601706 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology