Basic Information
Locus ID:
evm.TU.LG15.341
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 3293765 | 3303625 | - | evm.TU.LG15.341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 100,539.72 Da | 52.38 | 57.12 | -1.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 690 | 732 | 0.00521626 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 687 | 726 | 9.03E-5 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 26 | 373 | 2.47E-9 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 678 | 736 | 1.0E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 852 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 758 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 870 | 886 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 684 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 908 | - | - |
| Coils | Coil | Coil | 323 | 365 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021739543.1 | eukaryotic translation initiation factor 5B-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology