HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: evm.TU.LG15.1229
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr15 16481864 16492980 + evm.TU.LG15.1229
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.70 55,337.49 Da 54.79 65.73 -0.91
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 1 15 - -
MobiDBLite mobidb-lite consensus disorder prediction 154 168 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 169 - -
MobiDBLite mobidb-lite consensus disorder prediction 223 266 - -
MobiDBLite mobidb-lite consensus disorder prediction 104 147 - -
MobiDBLite mobidb-lite consensus disorder prediction 63 89 - -
MobiDBLite mobidb-lite consensus disorder prediction 211 266 - -
MobiDBLite mobidb-lite consensus disorder prediction 456 478 - -
MobiDBLite mobidb-lite consensus disorder prediction 40 54 - -
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Portulacaceae Portulaca oleracea 17 evm.TU.LG01.1698, evm.TU.LG02.2476, evm.TU.LG03.1864 ...
evm.TU.LG04.39, evm.TU.LG05.1991, evm.TU.LG06.1011, evm.TU.LG06.1558, evm.TU.LG06.948, evm.TU.LG09.354, evm.TU.LG12.1394, evm.TU.LG13.748, evm.TU.LG13.858, evm.TU.LG15.1229, evm.TU.LG20.875, evm.TU.LG20.987, evm.TU.LG21.919, evm.TU.LG24.849
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.