Basic Information
Locus ID:
evm.TU.LG15.1205
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 15876072 | 15882238 | - | evm.TU.LG15.1205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 109,991.12 Da | 38.18 | 86.80 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 86 | 363 | 1.26443E-98 | - |
| Pfam | PF01535 | PPR repeat | 506 | 532 | 0.08 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 677 | 705 | 0.0016 | IPR002885 |
| Pfam | PF13041 | PPR repeat family | 776 | 823 | 4.4E-8 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 478 | 503 | 0.18 | IPR002885 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 82 | 360 | 6.1E-49 | IPR001245 |
| Pfam | PF01535 | PPR repeat | 851 | 877 | 0.0042 | IPR002885 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 361 | 2.05E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 64 | 163 | 4.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 164 | 383 | 1.9E-61 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 751 | 958 | 1.0E-34 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 404 | 568 | 2.5E-18 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 574 | 733 | 1.7E-19 | IPR011990 |
| SMART | SM00220 | serkin_6 | 80 | 363 | 1.5E-45 | IPR000719 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 779 | 812 | 2.9E-6 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 506 | 540 | 0.0011 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 504 | 538 | 10.215989 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 674 | 708 | 9.920034 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 848 | 878 | 8.506026 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 776 | 811 | 10.172144 | IPR002885 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 363 | 41.403446 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 209 | 221 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 86 | 117 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 58 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17220.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021867284.1 | pentatricopeptide repeat-containing protein At2g17210 [Spinacia oleracea] | 0 |
| Q9SII6 | Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8S2A823 | Genome assembly, chromosome: 3 OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS8781 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg27612, jg27613 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_26338 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g212480 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg10913, Sbi_jg10915, Sbi_jg10916, Sbi_jg47421 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21663 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018759 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl55601, Sgl60815 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015190, gene:ENSEOMG00000039054 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0027890, CQ.Regalona.r1.7BG0001720 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30108780, pistato.v30169640 |
| Apiaceae | Apium graveolens | 1 | Ag10G00415 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G005360 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103701176 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2373.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G02897 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G17210.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10023059m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g30530.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g064900.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1847 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno10g08210 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11039 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.424 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G05603 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0151770, gene-QOZ80_2BG0207140 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0083550.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_020676 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G000060 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G609100, Tel1E01G609200, Tel1E01G609400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG054850, gene_TRIDC1BG062750 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G372800.1.cds1, TraesCS1B02G392800.1.cds1 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14772 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.1953, evm.TU.LG15.1205 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g14980 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.2381 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3192 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000016l.4 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18558 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599397 |
| Solanaceae | Solanum chilense | 1 | SOLCI003417500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107006501 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_8823 |
| Zosteraceae | Zostera marina | 1 | Zosma05g23610.v3.1 |