Basic Information
Locus ID:
evm.TU.LG14.959
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 29047599 | 29057004 | + | evm.TU.LG14.959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 99,287.20 Da | 40.15 | 76.78 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 244 | 328 | 2.56042E-19 | - |
| CDD | cd01098 | PAN_AP_plant | 660 | 748 | 1.64443E-18 | - |
| CDD | cd00028 | B_lectin | 393 | 505 | 4.27087E-35 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 672 | 733 | 3.4E-14 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 535 | 642 | 3.4E-22 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 1 | 86 | 1.4E-22 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 429 | 522 | 1.9E-31 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 120 | 226 | 1.1E-21 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 252 | 313 | 4.4E-14 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 1 | 127 | 3.8E-20 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 428 | 542 | 2.62E-25 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 378 | 504 | 3.2E-20 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 852 | 7.3E-6 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 1 | 87 | 1.5E-11 | - |
| SMART | SM00473 | ntp_6 | 673 | 747 | 3.7E-10 | IPR003609 |
| SMART | SM00108 | blect_4 | 385 | 506 | 7.1E-37 | IPR001480 |
| SMART | SM00473 | ntp_6 | 253 | 327 | 6.0E-7 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 376 | 531 | 1.1E-41 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 1 | 386 | 8.5E-82 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 525 | 774 | 1.0E-45 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 766 | 892 | 3.0E-18 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 56 | 13.003323 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 664 | 748 | 8.650633 | IPR003609 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 248 | 328 | 9.145679 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 379 | 503 | 19.026236 | IPR001480 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11300.2 | - | 0 |
| RefSeq | XP_052301197.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X5 [Populus trichocarpa] | 0 |
| Q9SXB4 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835DPD8 | Non-specific serine/threonine protein kinase OS=Tetracentron sinense OX=13715 GN=HHK36_003805 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG01.1731, evm.TU.LG01.1732, evm.TU.LG01.1733 ... |