Basic Information
Locus ID:
evm.TU.LG14.372
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 13195583 | 13200681 | - | evm.TU.LG14.372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 41,801.50 Da | 37.48 | 95.64 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 201 | 329 | 2.8E-12 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 40 | 113 | 2.0E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 34 | 142 | 8.24E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 184 | 330 | 2.35E-16 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 27 | 160 | 5.6E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 191 | 330 | 6.0E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 64 | 179 | 3.7 | IPR000782 |
| SMART | SM00554 | fasc_3 | 226 | 330 | 2.1E-12 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 28 | 175 | 10.749533 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 188 | 327 | 9.349369 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 372 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_010689281.2 | fasciclin-like arabinogalactan protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9A1R3 | Gamma-glutamyltransferase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology