Basic Information
Locus ID:
evm.TU.LG14.346
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 12615390 | 12620127 | - | evm.TU.LG14.346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 70,337.97 Da | 36.80 | 102.42 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 252 | 294 | 1.31121E-28 | - |
| Pfam | PF04564 | U-box domain | 248 | 318 | 2.5E-21 | IPR003613 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 460 | 497 | 2.5E-7 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 376 | 415 | 1.5E-10 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 417 | 457 | 2.7E-6 | IPR000225 |
| SUPERFAMILY | SSF48371 | ARM repeat | 346 | 620 | 1.04E-48 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 248 | 323 | 1.01E-30 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 8 | 121 | 1.3E-8 | IPR036537 |
| Gene3D | G3DSA:1.25.10.10 | - | 419 | 524 | 9.4E-28 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 333 | 418 | 2.3E-17 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 248 | 321 | 1.0E-31 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 525 | 626 | 3.4E-12 | IPR011989 |
| SMART | SM00185 | arm_5 | 376 | 416 | 2.5E-7 | IPR000225 |
| SMART | SM00185 | arm_5 | 458 | 498 | 0.0086 | IPR000225 |
| SMART | SM00185 | arm_5 | 417 | 457 | 9.8E-4 | IPR000225 |
| SMART | SM00185 | arm_5 | 499 | 539 | 4.8 | IPR000225 |
| SMART | SM00504 | Ubox_2 | 251 | 314 | 3.1E-35 | IPR003613 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 387 | 429 | 14.0174 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 428 | 470 | 9.712399 | IPR000225 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 247 | 321 | 46.353233 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54850.1 | plant U-box 14. Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. | 0 |
| RefSeq | XP_010666679.2 | U-box domain-containing protein 14 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VZ40 | U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9ERV6 | RING-type E3 ubiquitin transferase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology