Basic Information
Locus ID:
evm.TU.LG14.1729
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 39694892 | 39702920 | - | evm.TU.LG14.1729 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 141,780.11 Da | 55.29 | 83.57 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 1135 | 1177 | 8.14551E-20 | - |
| CDD | cd12108 | Hr-like | 36 | 169 | 4.37006E-18 | - |
| CDD | cd12108 | Hr-like | 599 | 745 | 2.58908E-18 | - |
| Pfam | PF13639 | Ring finger domain | 1134 | 1176 | 1.6E-6 | IPR001841 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 33 | 171 | 1.4E-9 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 1006 | 1081 | 1.0E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 597 | 746 | 3.2E-6 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1182 | 1239 | 1.6E-24 | IPR039512 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 1003 | 1062 | 3.79E-17 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1072 | 1127 | 2.09E-15 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1124 | 1182 | 7.95E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1128 | 1179 | 2.2E-9 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 32 | 189 | 5.9E-20 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 594 | 777 | 4.8E-16 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 292 | 436 | 6.5E-5 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1206 | 1241 | 1.1E-17 | - |
| SMART | SM00184 | ring_2 | 1135 | 1176 | 0.0018 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 999 | 1068 | 24.253357 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1135 | 1177 | 11.176261 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1071 | 1134 | 26.514444 | IPR017921 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 920 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 892 | 912 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18910.1 | zinc ion binding;zinc ion binding. | 0 |
| RefSeq | XP_010678609.1 | zinc finger protein BRUTUS-like At1g18910 [Beta vulgaris subsp. vulgaris] | 0 |
| F4IDY5 | Zinc finger protein BRUTUS-like At1g18910 OS=Arabidopsis thaliana OX=3702 GN=At1g18910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RX52 | Zinc finger protein BRUTUS-like At1g18910 OS=Spinacia oleracea OX=3562 GN=SOVF_024830 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology