Basic Information
Locus ID:
evm.TU.LG14.1714
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 39564207 | 39567517 | - | evm.TU.LG14.1714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 47,304.77 Da | 39.59 | 82.70 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 364 | 406 | 5.63963E-15 | - |
| Pfam | PF13639 | Ring finger domain | 365 | 406 | 4.3E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 359 | 409 | 2.43E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 334 | 411 | 1.3E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 365 | 405 | 2.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 365 | 406 | 12.681067 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44330.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008238538.2 | PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Prunus mume] | 0 |
| Q9BV68 | E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens OX=9606 GN=RNF126 PE=1 SV=2 | 0 | |
| TrEMBL | A0A314ZYG6 | E3 ubiquitin-protein ligase AIP2 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_27215 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 9 | evm.TU.LG01.2579, evm.TU.LG01.2604, evm.TU.LG01.2609 ... |