halophFGD

Basic Information

Locus ID: evm.TU.LG14.1657

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: A Receptor for Ubiquitination Targets

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr14	39126299	39127543	-	evm.TU.LG14.1657

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.77	47,397.24 Da	43.85	91.35	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	16	52	3.0E-7	IPR001810
SUPERFAMILY	SSF81383	F-box domain	14	62	1.1E-9	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	15	52	1.3E-5	-
SMART	SM00256	fbox_2	16	56	3.1E-5	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021848436.1	putative F-box protein At5g50220 [Spinacia oleracea]	0
TrEMBL	A0A0K9REL2	F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_081370 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Portulacaceae	Portulaca oleracea	4	evm.TU.LG01.2511, evm.TU.LG01.2514, evm.TU.LG14.1655 ... evm.TU.LG14.1657