Basic Information
Locus ID:
evm.TU.LG14.1617
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box kelch-repeat protein At3g23880-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 38536909 | 38539319 | - | evm.TU.LG14.1617 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 56,334.92 Da | 47.63 | 81.13 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 51 | 4.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 55 | 8.11E-9 | IPR036047 |
| SMART | SM00256 | fbox_2 | 15 | 55 | 2.1E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 116 | 341 | 8.4E-16 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 8.676143 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06240.1 | F-box family protein. | 0 |
| RefSeq | XP_021837908.1 | uncharacterized protein At5g39865 [Spinacia oleracea] | 0 |
| Q8GXC7 | F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9D7X2 | Glutaredoxin domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19492 |
| Brassicaceae | Brassica nigra | 1 | BniB04g002080.2N |
| Portulacaceae | Portulaca oleracea | 10 | evm.TU.LG01.2444, evm.TU.LG01.2445, evm.TU.LG01.2446 ... |