Basic Information
Locus ID:
evm.TU.LG13.95
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 815496 | 822296 | + | evm.TU.LG13.95 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 136,345.86 Da | 39.24 | 101.83 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 977 | 1198 | 5.0189E-118 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 663 | 954 | 1.985E-69 | IPR044726 |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 42 | 316 | 6.32374E-72 | IPR044746 |
| CDD | cd03250 | ABCC_MRP_domain1 | 414 | 617 | 6.08305E-86 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 666 | 917 | 2.9E-24 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 446 | 575 | 2.3E-11 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 42 | 292 | 3.4E-15 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 996 | 1145 | 4.6E-27 | IPR003439 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 665 | 959 | 1.15E-43 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 971 | 1206 | 2.62E-64 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 442 | 617 | 5.25E-37 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 32 | 326 | 1.31E-29 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 650 | 960 | 4.8E-48 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 962 | 1215 | 3.4E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 4 | 330 | 1.6E-38 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 408 | 641 | 1.8E-50 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1005 | 1197 | 2.2E-9 | IPR003593 |
| SMART | SM00382 | AAA_5 | 449 | 627 | 1.6E-9 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 42 | 308 | 27.969595 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 665 | 942 | 30.378668 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 407 | 651 | 15.633062 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 979 | 1214 | 16.079906 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 548 | 562 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_010682873.2 | putative ABC transporter C family member 15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R9G4 | ABC-type xenobiotic transporter OS=Spinacia oleracea OX=3562 GN=SOVF_091770 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology