Basic Information
Locus ID:
evm.TU.LG13.500
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 5021187 | 5023646 | + | evm.TU.LG13.500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 90,202.85 Da | 40.22 | 102.25 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 547 | 815 | 1.22331E-86 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 260 | 280 | 0.08 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 283 | 342 | 5.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 73 | 6.1E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 163 | 221 | 2.4E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 544 | 810 | 1.3E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 339 | 2.15E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 522 | 812 | 8.23E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 234 | 1.5E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 502 | 616 | 2.4E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 403 | 5.5E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 617 | 816 | 2.9E-59 | - |
| SMART | SM00220 | serkin_6 | 541 | 818 | 3.7E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 208 | 232 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 258 | 282 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 306 | 329 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 541 | 815 | 38.901726 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 547 | 569 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 661 | 673 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 463 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69270.1 | receptor-like protein kinase 1. RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1. | 0 |
| RefSeq | XP_021756718.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9ZRF9 | Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana OX=3702 GN=RPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RKU8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_060560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology