Basic Information
Locus ID:
evm.TU.LG13.442
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 4457734 | 4460119 | - | evm.TU.LG13.442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 51,783.38 Da | 55.26 | 51.87 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 215 | 271 | 1.6E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 364 | 421 | 2.3E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 212 | 273 | 5.23E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 355 | 423 | 8.63E-30 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 348 | 424 | 8.0E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 204 | 274 | 3.0E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 363 | 422 | 1.4E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 214 | 272 | 3.4E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 358 | 423 | 38.27375 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 215 | 273 | 23.38756 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 467 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021739996.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9DC04 | WRKY transcription factor 3 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology