Basic Information
Locus ID:
evm.TU.LG13.244
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2067628 | 2068647 | - | evm.TU.LG13.244 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 37,692.17 Da | 54.65 | 83.13 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 123 | 166 | 2.68057E-20 | - |
| Pfam | PF13639 | Ring finger domain | 123 | 166 | 1.2E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 103 | 172 | 4.04E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 99 | 171 | 1.4E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 124 | 165 | 1.4E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 124 | 166 | 12.238477 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010682597.2 | RING-H2 finger protein ATL46 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9REU5 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology